SHIROKANE SC

SHIROKANE, the supercomputer at Human Genome Center

SHIROKANE SC

利用実績のあるソフトウェア

把握している動作実績のあるソフトウェアの一覧です。ここでの実績とは、 SHIROKANE の計算ノードにインストールして提供したもの、ホームディレクトリにインストールし利用されたもののいずれかです。有償のソフトウェアについては、利用者がホームディレクトリにインストールし利用しています。

一般的なソフトウェア

  1. a2ps
  2. AGREP
  3. AMBER
  4. Anaconda
  5. Ant
  6. APR
  7. APR-util
  8. ATK
  9. ATLAS
  10. AT-SPI2
  11. Autoconf
  12. AutoGen
  13. Automake
  14. BerkeleyDB
  15. Binutils
  16. Bison
  17. BLAS
  18. Boost
  19. bzip2
  20. Cairo
  21. Cairomm
  22. c-blosc
  23. ccache
  24. cdb
  25. CLISP
  26. CLooG
  27. CMake
  28. cURL
  29. CVS
  30. DBus
  31. DBus-GLib
  32. DDD
  33. DejaGnu
  34. Diffutils
  35. DocBook-utils
  36. Doxygen
  37. Eclipse
  38. Eigen
  39. Emacs
  40. Expat
  41. Expect
  42. FANN
  43. FFmpeg
  44. FFTW
  45. fileutils
  46. findutils
  47. Flex
  48. fmirror
  49. Fontconfig
  50. FreeType
  51. FreeWnn
  52. GCC
  53. GConf
  54. GDB
  55. GDK-PixBuf
  56. gettext
  57. GHC
  58. Ghostscript
  59. Git
  60. GLib
  61. GLibmm
  62. Glimpse
  63. GlobusToolkit
  64. GLPK
  65. GMP
  66. GnuPG
  67. Gnuplot
  68. google-sparsehash
  69. gperf
  70. GraphicsMagick
  71. Graphviz
  72. grep
  73. GROMACS
  74. GSL
  75. GTK+
  76. Guile
  77. HarfBuzz
  78. HDF5
  79. HPN-SSH
  80. HSCP
  81. igraph
  82. ImageJ
  83. ImageMagick
  84. Inkscape
  85. isl
  86. Ispell
  87. Java
  88. Julia
  89. LAM
  90. LAPACK
  91. LAPACK++
  92. LaTeX
  93. LFTP
  94. libbonobo
  95. libbzip2
  96. libcanberra
  97. libevent
  98. libffi
  99. libgsf
  100. libiconv
  101. libIDL
  102. libjpeg
  103. libogg
  104. libpng
  105. LibreOffice
  106. librsync
  107. libsigc++
  108. libsodium
  109. libstatgrab
  110. libtiff
  111. Libtool
  112. libungif
  113. libunistring
  114. libvorbis
  115. libxml2
  116. libXpm
  117. libyaml
  118. LittleCMS
  119. Lua
  120. LV
  121. Lynx
  122. LZ4
  123. M4
  124. Make
  125. MATLAB_Compiler_Runtime
  126. matrix-toolkits-java
  127. Mercurial
  128. Mew
  129. mgzip
  130. MH
  131. MolScript
  132. MongoDB
  133. MPC
  134. MPFR
  135. MPICH
  136. MPICH2
  137. mpiJava
  138. MySQL
  139. NcFTP
  140. ncurses
  141. NetCDF
  142. netlib-java
  143. nkf
  144. Node.js
  145. Octave
  146. OpenBabel
  147. OpenCV
  148. OpenJPEG
  149. OpenMotif
  150. OpenMPI
  151. OpenSlide
  152. OpenSSL
  153. ORBit2
  154. P7ZIP
  155. Pango
  156. Pangomm
  157. Parallel
  158. PBZIP2
  159. PCRE
  160. pdsh
  161. Perl
  162. PHP
  163. Pixman
  164. pkg-config
  165. plotutils
  166. POPT
  167. PostgreSQL
  168. POV-Ray
  169. PPL
  170. Python
  171. Qt
  172. R
  173. Readline
  174. RLPR
  175. RStudio
  176. RStudio Desktop
  177. rsync
  178. Ruby
  179. SBCL
  180. screen
  181. Serf
  182. Singularity
  183. SoX
  184. SQLite
  185. STLport
  186. Subversion
  187. SUNDIALS
  188. SVN
  189. SWIG
  190. tar
  191. Tcl
  192. teTex
  193. Texinfo
  194. Tk
  195. tmux
  196. tree
  197. VIPS
  198. wget
  199. Xerces-C++
  200. XQilla
  201. XZ_Utils
  202. Yasm
  203. ZeroMQ
  204. zlib

バイオ系ソフトウェア

  1. ABySS
  2. ALSCRIPT
  3. AmberTools
  4. APT
  5. ARCS
  6. AUGUSTUS
  7. BamTools
  8. bcl2fastq
  9. BCL2FASTQ
  10. BEAGLE
  11. BEAST
  12. BEDTools
  13. biobambam2
  14. Bioconductor
  15. Biopieces
  16. Bioscope
  17. BLAST
  18. BLAST+
  19. BLAT
  20. Bowtie
  21. Bowtie2
  22. BWA
  23. Canu
  24. CAP3
  25. CD-HIT
  26. Circos
  27. ClustalW
  28. COPASI
  29. CREAD
  30. Cufflinks
  31. Cytoscape
  32. Darn
  33. DIAMOND
  34. DROMPA
  35. EMBOSS
  36. Exonerate
  37. eXpress
  38. FALCON
  39. FasnQC
  40. FasnTree
  41. FASTA
  42. FastML
  43. FastQC
  44. FastTree
  45. FASTX-Toolkit
  46. FreeBayes
  47. GENESIS
  48. GeneTorrent
  49. GMAP
  50. HISAT
  51. HISAT2
  52. HMMER
  53. IgBLAST
  54. IGV
  55. InterProScan
  56. io_lib
  57. Ion-Variant-Hunter
  58. Jellyfish
  59. JGAP
  60. Juicer
  61. Karn
  62. kClust
  63. libGTextUtils
  64. libsequence
  65. lobSTR
  66. MAFFT
  67. Maq
  68. MATLAB
  69. MCL
  70. MEGAHIT
  71. MEME
  72. MEME Suite
  73. Meta-MEME
  74. Minimap
  75. MMseqs
  76. MolScript
  77. MUMmer
  78. NCBI_Toolkit
  79. NCBI-CXX-Toolkin
  80. NEURON
  81. NovoAlign
  82. ORFfinder
  83. PASA
  84. PGENESIS
  85. PHYLIP
  86. phyx
  87. Picard
  88. Platanus
  89. Polysolver
  90. PRANK
  91. Prodigal
  92. RasMol
  93. Raster3D
  94. RAxML
  95. Roary
  96. Salmon
  97. SAMtools
  98. SEER
  99. SICER
  100. SnpEff
  101. SnringTie
  102. SOAPdenovo
  103. SOAPdenovo2
  104. SPAdes
  105. SRA
  106. SRA-Toolkin
  107. SSAKE
  108. STAR
  109. StochKit
  110. StringTie
  111. Tandem_Repeats_Finder
  112. TMAP
  113. TopHat
  114. Torrent_Variant_Caller
  115. TorrentSuite
  116. TRF
  117. Trinity
  118. VariationHunter
  119. VCFtools
  120. Velven
  121. Velvet
  122. VelvetOptimiser
  123. vidjil-algo
  124. VMD
  125. VSEARCH

R モジュール

  1. abind
  2. acepack
  3. ade4
  4. affy
  5. affydata
  6. affyio
  7. affyPLM
  8. affyQCReport
  9. akima
  10. annaffy
  11. annotate
  12. AnnotationDbi
  13. AnnotationForge
  14. AnnotationHub
  15. ape
  16. askpass
  17. assertthat
  18. ath1121501cdf
  19. ath1121501probe
  20. backports
  21. base
  22. base64enc
  23. BatchJobs
  24. baySeq
  25. BBmisc
  26. beanplot
  27. BH
  28. BiasedUrn
  29. Biobase
  30. BiocGenerics
  31. BiocInstaller
  32. BiocParallel
  33. biomaRt
  34. Biostrings
  35. bitops
  36. BMA
  37. boot
  38. brew
  39. BSgenome
  40. callr
  41. Category
  42. caTools
  43. checkmate
  44. ChIPpeakAnno
  45. chron
  46. class
  47. cli
  48. clipr
  49. clisymbols
  50. cluster
  51. codetools
  52. coloc
  53. colorspace
  54. compiler
  55. crayon
  56. curl
  57. datasets
  58. DBI
  59. DEoptimR
  60. desc
  61. DESeq
  62. DESeq2
  63. devtools
  64. dichromat
  65. digest
  66. dplyr
  67. DPpackage
  68. dynamicTreeCut
  69. DynDoc
  70. edgeR
  71. ensembldb
  72. evaluate
  73. fail
  74. fansi
  75. fields
  76. flashClust
  77. foreach
  78. foreign
  79. formatR
  80. Formula
  81. fpc
  82. fs
  83. gcrma
  84. gdata
  85. gee
  86. genefilter
  87. geneLenDataBase
  88. geneplotter
  89. GenomeInfoDb
  90. GenomicAlignments
  91. GenomicFeatures
  92. GenomicRanges
  93. ggplot2
  94. gh
  95. git2r
  96. glmmML
  97. glue
  98. gmodels
  99. goseq
  100. GOstats
  101. gplots
  102. graph
  103. graphics
  104. grDevices
  105. grid
  106. gridExtra
  107. GSEABase
  108. gsubfn
  109. gtable
  110. gtools
  111. hexbin
  112. hgu133plus2cdf
  113. hiAnnotator
  114. highr
  115. Hmisc
  116. htmltools
  117. htmlwidgets
  118. httpuv
  119. httr
  120. hwriter
  121. idr
  122. impute
  123. ini
  124. inline
  125. IRanges
  126. iterators
  127. itertools
  128. jsonlite
  129. KernSmooth
  130. knitr
  131. labeling
  132. lattice
  133. latticeExtra
  134. lazy
  135. lazyeval
  136. leaps
  137. limma
  138. lme4
  139. locfit
  140. magrittr
  141. maps
  142. markdown
  143. marray
  144. MASS
  145. Matrix
  146. MatrixModels
  147. matrixStats
  148. mclust
  149. memoise
  150. methods
  151. mgcv
  152. mime
  153. minqa
  154. mouse4302cdf
  155. multcomp
  156. multtest
  157. munsell
  158. mvtnorm
  159. nlme
  160. nloptr
  161. nnet
  162. openssl
  163. parallel
  164. pcaPP
  165. PEER
  166. perm
  167. pillar
  168. pkgbuild
  169. pkgconfig
  170. pkgload
  171. plyr
  172. polspline
  173. preprocessCore
  174. prettyunits
  175. processx
  176. proto
  177. ps
  178. purrr
  179. quantreg
  180. R6
  181. rae230acdf
  182. rat2302cdf
  183. RBGL
  184. rcmdcheck
  185. RColorBrewer
  186. Rcpp
  187. RcppArmadillo
  188. RcppEigen
  189. RCurl
  190. regioneR
  191. remotes
  192. reshape
  193. reshape2
  194. rgl
  195. Rgraphviz
  196. rJava
  197. rlang
  198. Rmpi
  199. rms
  200. robustbase
  201. ROC
  202. rpart
  203. rprojroot
  204. rrcov
  205. Rsamtools
  206. RSQLite
  207. rstudioapi
  208. rtracklayer
  209. S4Vectors
  210. samr
  211. sandwich
  212. scales
  213. scatterplot3d
  214. segmented
  215. sendmailR
  216. seqinr
  217. sessioninfo
  218. shiny
  219. ShortRead
  220. simpleaffy
  221. snow
  222. sourcetools
  223. sp
  224. spam
  225. SparseM
  226. spatial
  227. speedglm
  228. splines
  229. sqldf
  230. stats
  231. stats4
  232. stringi
  233. stringr
  234. SummarizedExperiment
  235. survival
  236. sys
  237. TCC
  238. tcltk
  239. tibble
  240. tools
  241. usethis
  242. utf8
  243. utils
  244. VennDiagram
  245. viridisLite
  246. vsn
  247. WGCNA
  248. whisker
  249. withr
  250. XML
  251. xopen
  252. xtable
  253. XVector
  254. yaml
  255. zlibbioc
  256. zoo

Ruby モジュール

  1. abstract
  2. actionmailer
  3. actionpack
  4. actionview
  5. activejob
  6. activemodel
  7. activerecord
  8. activerecord-deprecated_finders
  9. activesupport
  10. addressable
  11. arel
  12. atk
  13. atomic
  14. bigdecimal
  15. bio
  16. buftok
  17. builder
  18. bundler
  19. cairo
  20. cmath
  21. concurrent-ruby
  22. crass
  23. csv
  24. curses
  25. date
  26. dbm
  27. did_you_mean
  28. equalizer
  29. erubis
  30. etc
  31. faraday
  32. fcgi
  33. fcntl
  34. fiddle
  35. fileutils
  36. gdbm
  37. gdk_pixbuf2
  38. glib2
  39. globalid
  40. gnuplot
  41. gtk2
  42. hike
  43. hpricot
  44. http
  45. http_parser.rb
  46. i18n
  47. influxdb
  48. io-console
  49. ipaddr
  50. json
  51. loofah
  52. mail
  53. memoizable
  54. metaclass
  55. mime-types
  56. mini_mime
  57. mini_portile
  58. mini_portile2
  59. minitest
  60. mocha
  61. multi_json
  62. multipart-post
  63. mysql
  64. naught
  65. net-ldap
  66. net-telnet
  67. nokogiri
  68. openssl
  69. pango
  70. passenger
  71. pg
  72. pkg-config
  73. polyglot
  74. power_assert
  75. psych
  76. rack
  77. rack-test
  78. rails
  79. rails-deprecated_sanitizer
  80. rails-dom-testing
  81. rails-html-sanitizer
  82. railties
  83. rake
  84. rdoc
  85. ruby-ole
  86. scanf
  87. sdbm
  88. simple_oauth
  89. sources
  90. spreadsheet
  91. sprockets
  92. sprockets-rails
  93. stringio
  94. strscan
  95. test-unit
  96. thor
  97. thread_safe
  98. tilt
  99. tmail
  100. treetop
  101. twitter
  102. tzinfo
  103. webrick
  104. xmlparser
  105. xmlrpc
  106. zlib

Python モジュール

  1. alabaster
  2. atomicwrites
  3. attrs
  4. Babel
  5. backcall
  6. backports.ssl-match-hostname
  7. bamtofastq
  8. bcbio-gff
  9. biopython
  10. bleach
  11. brewer2mpl
  12. certifi
  13. chardet
  14. clint2
  15. configobj
  16. cycler
  17. Cython
  18. decorator
  19. defusedxml
  20. DendroPy
  21. docutils
  22. EEL
  23. egenix-mx-base
  24. entrypoints
  25. enum34
  26. futures
  27. h5py
  28. HTSeq
  29. idna
  30. imagesize
  31. intervaltree
  32. ipykernel
  33. ipython
  34. ipython-genutils
  35. ipywidgets
  36. jedi
  37. Jinja2
  38. jsonschema
  39. jupyter-client
  40. jupyter-core
  41. kiwisolver
  42. leveldb
  43. MACS
  44. MACS2
  45. MarkupSafe
  46. matplotlib
  47. mdtraj
  48. mercurial
  49. mistune
  50. mock
  51. more-itertools
  52. MuPeXI
  53. MySQL-python
  54. natsort
  55. nbconvert
  56. nbformat
  57. nglview
  58. nose
  59. notebook
  60. numexpr
  61. numpy
  62. NumPy
  63. packaging
  64. pandas
  65. pandocfilters
  66. parse
  67. parso
  68. pexpect
  69. pickleshare
  70. Pillow
  71. pip
  72. pluggy
  73. prometheus-client
  74. prompt-toolkit
  75. ptyprocess
  76. py
  77. pybedtools
  78. PyClone
  79. PyDP
  80. pygist
  81. Pygments
  82. pygraphviz
  83. pyparsing
  84. pysam
  85. pysql
  86. pysqlite
  87. pytest
  88. python-dateutil
  89. python-memcached
  90. pytz
  91. PyVCF
  92. PyYAML
  93. pyzmq
  94. reportlab
  95. requests
  96. rpy2
  97. scikit-learn
  98. scipy
  99. SCons
  100. scripttest
  101. seaborn
  102. Send2Trash
  103. setuptools
  104. Seurat
  105. shove
  106. simplegeneric
  107. singledispatch
  108. six
  109. snowballstemmer
  110. sortedcontainers
  111. Sphinx
  112. sphinxcontrib-websupport
  113. SQLAlchemy
  114. statistics
  115. stuf
  116. tables
  117. termcolor
  118. terminado
  119. testpath
  120. Theano
  121. tigmint
  122. tornado
  123. traitlets
  124. umap-learn
  125. urllib3
  126. wcwidth
  127. webencodings
  128. widgetsnbextension

Perl モジュール

  1. Ace
  2. AI::FANN
  3. AI::Genetic
  4. Algorithm::Cluster
  5. Algorithm::Combinatorics
  6. Algorithm::Diff
  7. Algorithm::Diff::XS
  8. Algorithm::Loops
  9. Algorithm::Munkres
  10. Algorithm::SVM
  11. aliased
  12. Any::Moose
  13. App::CLI
  14. App::gh
  15. AppConfig
  16. Archive::Any::Lite
  17. Archive::Tar
  18. Archive::Zip
  19. Array::Compare
  20. Array::Diff
  21. Array::Utils
  22. Astro::FITS::Header
  23. Authen::NTLM
  24. Authen::SASL
  25. B::Hooks::EndOfScope
  26. B::Hooks::OP::Check
  27. bareword::filehandles
  28. Bio
  29. Bio::ASN1::EntrezGene
  30. Bio::Das
  31. Bio::DB::BioDB
  32. Bio::DB::Das::BioSQL
  33. Bio::DB::Das::Chado
  34. Bio::DB::Sam
  35. Bio::Ext::Align
  36. Bio::Graphics
  37. Bio::Phylo
  38. Bio::SamTools
  39. Bio::SCF
  40. Bit::Vector
  41. BSD::Resource
  42. Business::ISBN
  43. Business::ISBN::Data
  44. Cache::Cache
  45. Cache::LRU
  46. Cache::Memcached
  47. Calendar::Japanese::Holiday
  48. Calendar::Simple
  49. Canary::Stability
  50. Capture::Tiny
  51. Carp::Clan
  52. CGI
  53. CGI::Ajax
  54. CGI::FastTemplate
  55. CGI::Session
  56. CGI::Simple
  57. Chatbot
  58. Class::Accessor
  59. Class::Accessor::Chained
  60. Class::Accessor::Grouped
  61. Class::AutoClass
  62. Class::Base
  63. Class::Data::Inheritable
  64. Class::DBI
  65. Class::DBI::AbstractSearch
  66. Class::DBI::Loader
  67. Class::DBI::mysql
  68. Class::DBI::Sweet
  69. Class::Inspector
  70. Class::ISA
  71. Class::Load
  72. Class::Method::Modifiers
  73. Class::Singleton
  74. Class::Std
  75. Class::Std::Utils
  76. Class::Tiny
  77. Class::Trigger
  78. Class::XSAccessor
  79. Clone
  80. common::sense
  81. Compress::Raw::Bzip2
  82. Compress::Raw::Zlib
  83. Config::General
  84. Config::IniFiles
  85. Config::Pit
  86. Config::Simple
  87. Convert::ASN1
  88. Convert::Binary::C
  89. Convert::BinHex
  90. Convert::EBCDIC
  91. Convert::UU
  92. CPAN
  93. CPAN::DistnameInfo
  94. CPAN::Meta
  95. CPAN::Meta::Check
  96. CPAN::Meta::YAML
  97. Cpanel::JSON::XS
  98. CPANPLUS
  99. Crypt::DH
  100. Crypt::DH::GMP
  101. Crypt::OpenSSL::Random
  102. Crypt::OpenSSL::RSA
  103. Crypt::OpenSSL::X509
  104. Crypt::RC4
  105. Crypt::SSLeay
  106. Cwd
  107. Data
  108. Data::Dump
  109. Data::Dumper
  110. Data::OptList
  111. Data::Page
  112. Data::Perl
  113. Data::Section
  114. Data::TemporaryBag
  115. Data::UUID
  116. Date::Calc
  117. Date::Manip
  118. Date::Parse
  119. DateTime
  120. DateTime::Format::Epoch
  121. DateTime::Format::Mail
  122. DateTime::Format::W3CDTF
  123. DateTime::Locale
  124. DateTime::TimeZone
  125. DB_File
  126. DB_File::Lock
  127. DBD::Multiplex
  128. DBD::mysql
  129. DBD::Pg
  130. DBD::SQLite
  131. DBI
  132. DBI::Shell
  133. DBIx::Connector
  134. DBIx::ContextualFetch
  135. Devel::Caller
  136. Devel::CheckCompiler
  137. Devel::CheckLib
  138. Devel::CoreStack
  139. Devel::Cycle
  140. Devel::GlobalDestruction
  141. Devel::Hide
  142. Devel::LexAlias
  143. Devel::OverloadInfo
  144. Devel::Size
  145. Devel::StackTrace
  146. Devel::Symdump
  147. diffReps
  148. Digest::HMAC
  149. Digest::Perl::MD5
  150. Digest::SHA
  151. Digest::SHA1
  152. DIME::Tools
  153. Dist::CheckConflicts
  154. Email::Date::Format
  155. Encode
  156. Encode::Locale
  157. Error
  158. Eval::Closure
  159. Exception::Class
  160. Exporter::Declare
  161. Exporter::Tiny
  162. ExtUtils::CBuilder
  163. ExtUtils::Config
  164. ExtUtils::Depends
  165. ExtUtils::F77
  166. ExtUtils::Helpers
  167. ExtUtils::InstallPaths
  168. ExtUtils::MakeMaker
  169. ExtUtils::MakeMaker::CPANfile
  170. ExtUtils::ParseXS
  171. ExtUtils::PkgConfig
  172. FCGI
  173. Fennec::Lite
  174. File::Copy::Recursive
  175. File::Find::Object
  176. File::Find::Rule
  177. File::Grep
  178. File::HomeDir
  179. File::Listing
  180. File::NFSLock
  181. File::pushd
  182. File::ShareDir
  183. File::ShareDir::Install
  184. File::Slurp
  185. File::Slurp::Tiny
  186. File::Slurper
  187. File::Temp
  188. File::Which
  189. Font::AFM
  190. Font::TTF
  191. FreezeThaw
  192. GBrowse
  193. GD
  194. GD::Barcode
  195. GD::Graph
  196. GD::Graph::histogram
  197. GD::SVG
  198. GD::Text
  199. Geo::Distance
  200. Getopt::Long::Descriptive
  201. Getopt::Simple
  202. Git
  203. Graph
  204. Graph::ReadWrite
  205. GraphViz
  206. Hash::AutoHash
  207. Hash::AutoHash::Args
  208. Hash::FieldHash
  209. Hash::Merge
  210. Hash::NoRef
  211. Heap
  212. HTML::Form
  213. HTML::Formatter
  214. HTML::Parser
  215. HTML::Strip
  216. HTML::Tagset
  217. HTML::Template
  218. HTML::Template::Pro
  219. HTML::Tree
  220. HTML-TableExtract
  221. HTTP::Cookies
  222. HTTP::Daemon
  223. HTTP::Daemon::SSL
  224. HTTP::Date
  225. HTTP::Message
  226. HTTP::Negotiate
  227. HTTP::Server::Simple
  228. Ima::DBI
  229. Image::Magick
  230. Image::Size
  231. Importer
  232. indirect
  233. Inline
  234. IO::Capture
  235. IO::CaptureOutput
  236. IO::Compress
  237. IO::HTML
  238. IO::Prompt
  239. IO::SessionData
  240. IO::Socket::SSL
  241. IO::String
  242. IO::Stringy
  243. IO::Tee
  244. IO::Tty
  245. IPC::Run
  246. IPC::Run3
  247. IPC::Shareable
  248. IRI
  249. Jcode
  250. JSON
  251. JSON::Any
  252. JSON::MaybeXS
  253. JSON::PP
  254. JSON::XS
  255. Lexical::SealRequireHints
  256. libwww::perl
  257. libxml-perl
  258. Lingua::EN::Inflect
  259. Lingua::EN::Inflect::Number
  260. List::MoreUtils
  261. List::MoreUtils::XS
  262. List::Util
  263. Log::Log4perl
  264. Log::Report
  265. Log::Report::Optional
  266. lsid::perl
  267. LWP
  268. LWP::MediaTypes
  269. LWP::Parallel
  270. LWP::Protocol::http10
  271. LWP::Protocol::https
  272. Mail
  273. Mail::Sendmail
  274. MailTools
  275. Math::Bezier
  276. Math::CDF
  277. Math::Derivative
  278. Math::Random
  279. Math::Random::MT
  280. Math::Round
  281. Math::Spline
  282. Math::Utils
  283. Math::VecStat
  284. Meta::Builder
  285. MIME::Charset
  286. MIME::Lite
  287. MIME::tools
  288. MIME::Tools
  289. MIME::Types
  290. MIME-tools
  291. MLDBM
  292. MOBY
  293. Mock::Quick
  294. mod_perl2
  295. Module::Build
  296. Module::Build::Tiny
  297. Module::Build::XSUtil
  298. Module::CPANfile
  299. Module::CPANTS::Analyse
  300. Module::ExtractUse
  301. Module::Implementation
  302. Module::Pluggable
  303. Module::Refresh
  304. Module::Runtime
  305. Module::Runtime::Conflicts
  306. Moo
  307. Moose
  308. MooX::HandlesVia
  309. MooX::Types::MooseLike
  310. Mouse
  311. Mozilla::CA
  312. MRO::Compat
  313. multidimensional
  314. namespace::autoclean
  315. namespace::clean
  316. Net
  317. Net::DNS
  318. Net::Google::AuthSub
  319. Net::Google::DataAPI
  320. Net::Google::Spreadsheets
  321. Net::HTTP
  322. Net::IP
  323. Net::Jabber
  324. Net::LDAP
  325. Net::NTP
  326. Net::OAuth
  327. Net::OAuth2
  328. Net::OpenID::Common
  329. Net::OpenID::Consumer
  330. Net::SMTP::SSL
  331. Net::SSLeay
  332. Net::Telnet
  333. Net::Traceroute
  334. Net::XMPP
  335. Number::Compare
  336. Number::Format
  337. OLE::Storage_Lite
  338. OpenGL
  339. Package::DeprecationManager
  340. Package::Stash
  341. Package::Stash::XS
  342. PadWalker
  343. Params::Classify
  344. Params::Util
  345. Params::Validate
  346. Params::ValidationCompiler
  347. Parse::CPAN::Meta
  348. Parse::RecDescent
  349. Parse::Yapp
  350. Path::Class
  351. Path::Tiny
  352. PDF::API2
  353. PDL
  354. Perl
  355. Perl::Tidy
  356. perlindex
  357. PerlIO::gzip
  358. PerlIO::utf8_strict
  359. Pod::Coverage
  360. Pod::Plainer
  361. Pod::Spell
  362. Pod::Spell::CommonMistakes
  363. Pod::Strip
  364. PostScript::Metrics
  365. Probe::Perl
  366. Proc::ProcessTable
  367. RDF::Core
  368. Readonly
  369. Ref::Util
  370. Ref::Util::XS
  371. Regexp::Common
  372. Regexp::Util
  373. Role::Tiny
  374. RPC::XML
  375. Safe::Hole
  376. Safe::World
  377. Scope::Guard
  378. Seeder
  379. Set::IntSpan
  380. Set::Scalar
  381. SGMLSpm
  382. SOAP::Lite
  383. SOAP::Transport::FTP
  384. SOAP::Transport::JABBER
  385. SOAP::Transport::TCP
  386. Socket
  387. Software::License
  388. Software::License::CCpack
  389. Sort::Naturally
  390. Specio
  391. Spiffy
  392. Spreadsheet::ParseExcel
  393. Spreadsheet::WriteExcel
  394. Spreadsheet::XLSX
  395. SQL::Abstract
  396. SQL::Abstract::Limit
  397. Statistics::Basic
  398. Statistics::Descriptive
  399. Statistics::Distributions
  400. Statistics::RankCorrelation
  401. Statistics::TTest
  402. Storable
  403. strictures
  404. String::CRC32
  405. String::Print
  406. Sub::Exporter
  407. Sub::Exporter::Progressive
  408. Sub::Identify
  409. Sub::Info
  410. Sub::Install
  411. Sub::Name
  412. Sub::Quote
  413. Sub::Uplevel
  414. SUPER
  415. SVG
  416. SVG::Graph
  417. SWF::File
  418. Switch
  419. Sys::Hostname::Long
  420. TAP::Parser::SourceHandler::pgTAP
  421. Task::Weaken
  422. Template
  423. Template::Plugin::Number::Format
  424. Template::Toolkit::Simple
  425. Template-Plugin-Autoformat
  426. Term::ReadKey
  427. Term::ReadLine
  428. Term::ReadLine::Gnu
  429. Term::Size::Any
  430. Term::Size::Perl
  431. Term::Table
  432. Test::Base
  433. Test::CheckDeps
  434. Test::CleanNamespaces
  435. Test::Deep
  436. Test::Differences
  437. Test::Exception
  438. Test::Exception::LessClever
  439. Test::FailWarnings
  440. Test::Fatal
  441. Test::File
  442. Test::File::ShareDir
  443. Test::Fork
  444. Test::Harness
  445. Test::Harness::Straps
  446. Test::Inter
  447. Test::JSON
  448. Test::Kwalitee
  449. Test::LeakTrace
  450. Test::Manifest
  451. Test::Memory::Cycle
  452. Test::MockModule
  453. Test::MockObject
  454. Test::MockRandom
  455. Test::More::UTF8
  456. Test::Most
  457. Test::Needs
  458. Test::NoWarnings
  459. Test::Number::Delta
  460. Test::Output
  461. Test::Pod
  462. Test::Pod::Content
  463. Test::Pod::Coverage
  464. Test::Regexp
  465. Test::Requires
  466. Test::RequiresInternet
  467. Test::Script
  468. Test::Simple
  469. Test::Taint
  470. Test::Tester
  471. Test::use::ok
  472. Test::UseAllModules
  473. Test::utf8
  474. Test::Warn
  475. Test::Warnings
  476. Test::Without::Module
  477. Test::XML
  478. Test::YAML
  479. Test2::Plugin::NoWarnings
  480. Test2::Suite
  481. Text::Aligner
  482. Text::Autoformat
  483. Text::CSV
  484. Text::CSV_XS
  485. Text::Diff
  486. Text::Format
  487. Text::Glob
  488. Text::Iconv
  489. Text::Reform
  490. Text::Scan
  491. Text::Shellwords
  492. Text::Table
  493. Text::Template
  494. Tie::DB_FileLock
  495. Tie::DB_Lock
  496. Tie::Hash::MultiValue
  497. Tie::IxHash
  498. Tie::ToObject
  499. Tie::Watch
  500. Time::Piece::MySQL
  501. TimeDate
  502. Tk
  503. Tk::HistEntry
  504. Tk::Pod
  505. Tree::DAG_Node
  506. Try::Tiny
  507. Type::Tie
  508. Type::Tiny
  509. Type::Tiny::XS
  510. Types::Serialiser
  511. Unicode::LineBreak
  512. Unicode::Map
  513. Unicode::String
  514. Unicode::UTF8
  515. UNIVERSAL::can
  516. UNIVERSAL::isa
  517. UNIVERSAL::moniker
  518. UNIVERSAL::require
  519. URI
  520. Variable::Magic
  521. version
  522. Want
  523. WSRF::Lite
  524. WWW::Mechanize
  525. WWW::RobotRules
  526. XML::Atom
  527. XML::CanonicalizeXML
  528. XML::CommonNS
  529. XML::Compile
  530. XML::Compile::Cache
  531. XML::Compile::SOAP
  532. XML::Compile::Tester
  533. XML::Compile::WSDL11
  534. XML::DOM
  535. XML::DOM::XPath
  536. XML::Filter::BufferText
  537. XML::Handler::YAWriter
  538. XML::LibXML
  539. XML::LibXML::Simple
  540. XML::LibXSLT
  541. XML::Namespace
  542. XML::NamespaceFactory
  543. XML::NamespaceSupport
  544. XML::Node
  545. XML::Parser
  546. XML::Parser::Lite
  547. XML::Quote
  548. XML::RegExp
  549. XML::RSS
  550. XML::SAX
  551. XML::SAX::Base
  552. XML::SAX::Expat
  553. XML::SAX::Writer
  554. XML::SemanticCompare
  555. XML::SemanticDiff
  556. XML::Simple
  557. XML::Stream
  558. XML::Twig
  559. XML::Writer
  560. XML::XPath
  561. XML::XPathEngine
  562. XML-DOM
  563. YAML
  564. YAML::LibYAML
  565. YAML::Syck
  566. YAML::Tiny