{"id":1744,"date":"2020-09-14T20:43:26","date_gmt":"2020-09-14T11:43:26","guid":{"rendered":"https:\/\/gc.hgc.jp\/?page_id=1744"},"modified":"2023-04-13T13:28:27","modified_gmt":"2023-04-13T04:28:27","slug":"seminar-materials","status":"publish","type":"page","link":"https:\/\/gc.hgc.jp\/en\/util-info\/seminar-materials\/","title":{"rendered":"\ud83d\udd11Workshop Documents"},"content":{"rendered":"\n<ul><li>This page provides access to documents related to workshops hosted by HGC.<\/li><li>Please note that SHIROKANE is constantly updating its system and the content of outdated material may be inconsistent with the current system.<\/li><li><strong>It is prohibited to modify or redistribute these documents without permission.<\/strong><\/li><li>You need to log in to your SHIROKANE account to view the documents.<\/li><\/ul>\n\n\n\n<h4>SHIROKANE Tutorial (held on November, 2022)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20221104\/20221104-user_en.pdf\">Introduction for new users of SHIROKANE<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20221104\/20221104-job_en.pdf\">Tips for running jobs on a large scale<\/a><\/p>\n\n\n\n<h4>Tutorial about Bioinformatics of Transcriptional Regulation (Sep, 29, 2012)<\/h4>\n\n\n\n<p>Tutorial about Bioinformatics of Transcriptional Regulation 1<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20121129\/20121130_1.pdf\">Tutorial about Bioinformatics of Transcriptional Regulation 2<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20121129\/20121130_2.pdf\">Tutorial about Bioinformatics of Transcriptional Regulation 3<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-mov\/20121129\/20121129_bio.mov\">Tutorial about Bioinformatics of Transcriptional Regulation<\/a> Video<\/p>\n\n\n\n<h4>Tutorial about the statistical language R (held on February 16-17, 2012)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20120216-0217\/20120216-0217-TU_Rcourse_01.pdf\">Tutorial about the statistical language R (1)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20120216-0217\/20120216-0217-TU_Rcourse_02.pdf\">Tutorial about the statistical language R (2)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20120216-0217\/20120216-0217-TU_Rcourse_03.pdf\">Tutorial about the statistical language R (3)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20120216-0217\/20120216-0217-TU_Rcourse_04.pdf\">Tutorial about the statistical language R (4)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20120216-0217\/20120216-0217-TU_Rcourse_05.pdf\">Tutorial about the statistical language R (5)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-data\/20120216-0217\/data.tar.gz\">Tutorial about the statistical language R Data<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20120216-0217\/20120216-0217-TU_Rcourse_task.pdf\">Tutorial about the statistical language R Task<\/a><\/p>\n\n\n\n<h4>MPI Workshop (held on May 26, 27 2010)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20100526-MPI-1.pdf\">MPI Workshop1<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20100526-MPI-2.pdf\">MPI Workshop2<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20100526-MPI-3.pdf\">MPI Workshop3<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-mov\/20100526\/20100526-MPI1.mov\">MPI Workshop (May 26, 2010)<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-mov\/20100526\/20100526-MPI2.mov\">MPI Workshop (May 27, 2010)<\/a> Video<\/p>\n\n\n\n<h4>Using the Sun Grid Engine &amp; Instructions for executing jobs on a large scale (held on April 28, 2010)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20100428_sge-2_en.pdf\">Instructions for executing jobs on a large scale (English)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-mov\/20100428\/20100428-sge1.mov\">Using the Sun Grid Engine<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-mov\/20100428\/20100428-sge2.mov\">Instructions for executing jobs on a large scale<\/a> Video<\/p>\n\n\n\n<h4>Introduction for New Users of the Super Computer System &amp; Introduction to UNIX (held on April 27, 2010)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20100427-supcom.pdf\">Outline of the super computer system<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-mov\/20100427\/20100427-user.mov\">Introduction for New Users of the Super Computer System<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-mov\/20100427\/20100427-supcom.mov\">Outline of the super computer system<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-mov\/20100427\/20100427-linux.mov\">Introduction to LINUX<\/a> Video<\/p>\n\n\n\n<h4>Tutorial about the statistical language R (held on October 1-2, 2009)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20091001-TU_Rcourse_01.pdf\">Tutorial about the statistical language R (1)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20091001-TU_Rcourse_01.pdf\">Tutorial about the statistical language R (2)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20091001-TU_Rcourse_01.pdf\">Tutorial about the statistical language R (3)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20091001-TU_Rcourse_01.pdf\">Tutorial about the statistical language R (4)<\/a><\/p>\n\n\n\n<h4>Using Pipeline Pilot (held on May 19, 2009)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-pdf\/20090519-pipelinepilot.pdf\">Using Pipeline Pilot<\/a><\/p>\n\n\n\n<h4>Using the Sun Grid Engine (held on April 28, 2009)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090428-SGE_v2.pdf\">Using the Sun Grid Engine (English)<\/a> (This version incorporates changes to the method of releasing the memory use limit, as implemented on May 27, 2009.)<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-mov\/20090428\/20090428-sge-1.mov\">Using the Sun Grid Engine (first part)<\/a> Video <a href=\"https:\/\/supcom.hgc.jp\/internal\/materials\/lect-mov\/20090428\/20090428-sge-2.mov\">(second part)<\/a> Video<\/p>\n\n\n\n<h4>Introduction for New Users of the Super Computer System &amp; Introduction to UNIX (held on April 27, 2009)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090427-supcom.pdf\">Outline of the super computer system<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090427-linux.pdf\">Introduction to LINUX (English)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090427\/20090427-user.mov\">Introduction for New Users of the Super Computer System<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090427\/20090427-supcom.mov\">Outline of the super computer system<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090427\/20090427-linux.mov\">Introduction to LINUX<\/a><a href=\"https:\/\/blog.hgc.jp:8443\/control\/mt.cgi?__mode=view&amp;_type=entry&amp;id=3299&amp;blog_id=115\">.<\/a> Video<\/p>\n\n\n\n<h4>KEGG\/GenomeNet database (held on January 29-30, 2009)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090129-kegg-genomenet_01.pdf\">Sequence data (GENES, KAAS, KO)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090129-kegg-genomenet_02.pdf\">Pathway data (PATHWAY, Atlas, KGML)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090129-kegg-genomenet_03.pdf\">Plant metabolism\/Chemical data (PLANT, LIGAND)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090129-kegg-genomenet_04.pdf\">Disease\/BRITE data (DISEASE, BRITE, KegHier)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090129-kegg-genomenet_05.pdf\">Medical product data (Drug, JAPIC, KegDraw)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090130-kegg-genomenet_01.pdf\">Sequence analysis tools 1 (BLAST\/FASTA, MOTIF) Sequence analysis tools 2 (CLUSTALW\/MAFFT\/PRRN, KegArray)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090130-kegg-genomenet_02.pdf\">Chemical analysis tools (Simcomp, e-zyme, KCaM, GECS)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090130-kegg-genomenet_03.pdf\">Using the database via KEGG API<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090229-KEGG-1020-1120\/KEGG29th_1020-1120.mov\">Sequence data (GENES, KAAS, KO)<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090229-KEGG-1130-1230\/KEGG29th_1130-1230.mov\">Pathway data (PATHWAY, Atlas, KGML)<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090229-KEGG-1340-1440\/KEGG29th_1340-1440.mov\">Plant metabolism\/Chemical data (PLANT, LIGAND)<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090229-KEGG-1450-1550\/KEGG29th_1450-1550.mov\">Disease\/BRITE data (DISEASE, BRITE, KegHier)<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090229-KEGG-1600-1700\/KEGG29th_1600-1700.mov\">Medical product data (Drug, JAPIC, KegDraw)<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090230-KEGG-1020-1120\/KEGG30th_1020-1120.mov\">Sequence analysis tools 1 (BLAST\/FASTA, MOTIF)<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090230-KEGG-1130-1230\/KEGG30th_1130-1230.mov\">Sequence analysis tools 2 (CLUSTALW\/MAFFT\/PRRN, KegArray)<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090230-KEGG-1340-1440\/KEGG30th_1340-1440.mov\">Chemical analysis tools (Simcomp, e-zyme, KCaM, GECS)<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090230-KEGG-1450-1550\/KEGG30th_1450-1550.mov\">Using the database via KEGG API<\/a> Video<\/p>\n\n\n\n<h4>The Biological Interpretation of Gene Expression Profiles (held on January 27, 2009)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090127-biobase_03.pdf\">Introduction to BKL<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090127-biobase_01.pdf\">Promoter analysis of genes induced upon activation of PAR-1<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090127-biobase_02.pdf\">Biological interpretation of high-throughput gene expression profiles using BIOBASE&#8217;s ExPlain<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090127-biobase1\/biobase1.mov\">Biological interpretation of high-throughput gene expression profiles using BIOBASE&#8217;s ExPlain (1)<\/a> Video<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090127-biobase2\/biobase2.mov\">Biological interpretation of high-throughput gene expression profiles using BIOBASE&#8217;s ExPlain (2)<\/a> Video<\/p>\n\n\n\n<h4>The New Super Computer System (held on January 19, 2009)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20090119-new-system.pdf\">The New Super Computer System<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-mov\/20090119-new-system\/20090119-new-system.mov\">The New Super Computer System<\/a> Video<\/p>\n\n\n\n<h4>The Statistical Language R (held on August 6, 2008)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080806-TU_Rcourse_01.pdf\">Short Introduction to the Statistical Language R<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080806-TU_Rcourse_02.pdf\">Understanding data<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080806-TU_Rcourse_03.pdf\">Regression AOVA classical tests<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080806-TU_Rcourse_06.pdf\">Plotting<\/a><\/p>\n\n\n\n<h4>Using the Web Service (held on June 5, 2008)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080605-sss-higet.pdf\">Higet &amp; SSS<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080605-genecards.pdf\">Introduction to GeneCards<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080605-dbtbs.pdf\">Introduction to the DBTBS database and transcriptional regulation in bacteria<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080605-dbtss.pdf\">Introduction to the DBTSS database<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080605-coxpresdb.pdf\">COXPRES<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080605-psort.pdf\">PSORT:Prediction system of protein localization sites in cells<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080605-pdbj-efsite.pdf\">Introduction to PDBj &amp; eF-site<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080605-kegg.pdf\">Introduction to the KEGG database<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080605-togodb.pdf\">Introduction to the Database Center for Life Science<\/a><\/p>\n\n\n\n<h4>Using the Sun Grid Engine &amp; Using the PC Cluster (held on April 23, 2008)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080423-sge.pdf\">Using the Sun Grid Engine<\/a>&nbsp;(For Sun Fire 15K, 6800)<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080423-PCCluster.pdf\">Using the PC Cluster<\/a><\/p>\n\n\n\n<h4>Introduction for New Users of the Super Computer System &amp; Introduction to UNIX (held on April 22, 2008)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080422-supcom.pdf\">Outline of the super computer system<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20080422-unix.pdf\">Basic operation of LINUX<\/a><\/p>\n\n\n\n<h4>Introduction for New Users of the Super Computer System &amp; Introduction to UNIX (held on October 16, 2007)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20071016-network.pdf\">Overview of the Network<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20071016-supcom.pdf\">Outline of the super computer system<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20071016-unix.pdf\">Basic operation of LINUX<\/a><\/p>\n\n\n\n<h4>The Statistical Language R (held on August 2-3, 2007)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070802_R01.pdf\">Day 1 document1<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070802_R02.pdf\">Day 1 document2<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070802_R03.pdf\">Day 2 document1<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070802_R04.pdf\">Day 3 document2<\/a><\/p>\n\n\n\n<h4>Using the Web Service (held on May 22, 2007)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070522-SSS-HiGet.pdf\">HiGet &amp; SSS<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070522-GeneCards.pdf\">Introduction to GeneCards<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070522-DBTBS.pdf\">Introduction to the DBTSS database and transcriptional regulation in bacteria<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070522-DBTSS.pdf\">Introduction to the DBTSS database<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070522-COXPRES.pdf\">COXPRES<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070522-PSORT.pdf\">PSORT:Prediction system of protein localization sites in cells<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070522-PDBj-eF-site.pdf\">Introduction to PDBj &amp; eF-site<\/a><\/p>\n\n\n\n<h4>Using the Sun Grid Engine (held on April 27, 2007)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070427-sge.pdf\">Using the Sun Grid Engine<\/a>&nbsp;(For Sun Fire 15K, 6800)<\/p>\n\n\n\n<h4>Introduction for New Users of the Super Computer System &amp; Introduction to UNIX (held on April 26, 2007)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070426-network.pdf\">Overview of the Network<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070426-supcom.pdf\">Outline of the super computer system<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20070426-unix.pdf\">Basic operation of LINUX<\/a><\/p>\n\n\n\n<h4>Introduction for New Users of the Super Computer System &amp; Introduction to UNIX (held on October 24, 2006)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20061024-network.pdf\">Overview of the Network<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20061024-supcom.pdf\">Outline of the super computer system<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20061024-database.pdf\">Outline of databases<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20061024-unix.pdf\">Basic operation of LINUX<\/a><\/p>\n\n\n\n<h4>Using the Sun Grid Engine (held on April 25, 2006)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20060425-sge.pdf\">Using the Sun Grid Engine<\/a>&nbsp;(For Sun Fire 15K, 6800)<\/p>\n\n\n\n<h4>Introduction for New Users of the Super Computer System &amp; Introduction to UNIX (held on April 24, 2006)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20060424-network.pdf\">Overview of the Network<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20060424-supcom.pdf\">Outline of the super computer system<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20060424-database.pdf\">Outline of the databases<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20060424-unix.pdf\">Basic operation of LINUX<\/a><\/p>\n\n\n\n<h4>Using GCG (held on October 6-7, 2005)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20051006-SeqWeb.pdf\">SeqWeb (Web)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20051006-GCG.pdf\">GCG (command line)<\/a><\/p>\n\n\n\n<h4>Using the databases (held on July 8, 2005)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20050708-hgcdb.pdf\">Introduction to the databases available at the Human Genome Center<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20050708-genomenet.pdf\">Introduction to the databases available on GenomeNet<\/a> (<a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-web\/20050708_web_genomenet\/db0708.html\">handout<\/a>)<br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-web\/20050708_web_genes\/tokyo.html\">Practice in using the GENES database in KEGG<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-web\/20050708_web_pathway\/index.html\">Practice in using the PATHWAY database in KEGG<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20050708-dbtss.pdf\">Introduction to the DBTSS database<\/a>,&nbsp;<a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20050708-dbtss2.pdf\">Handout of promoter region analysis<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20050708-pdb.pdf\">Invited lecture: The PDB and PDBj protein structure databases<\/a><\/p>\n\n\n\n<h4>Using the Sun Grid Engine (held on May 26, 2005)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20050527-SGE-sunfire.pdf\">Using the Sun Grid Engine<\/a>&nbsp;(For Sun Fire 15K, 6800)<\/p>\n\n\n\n<h4>Introduction for New Users of the Super Computer System &amp; Introduction to UNIX (held on May 24, 2005)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20050524-network.pdf\">Overview of the Network<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20050524-hgc.pdf\">Outline of the super computer system<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20050524-database.pdf\">Outline of the databases<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20050524-unix.pdf\">Basic operation of LINUX<\/a><\/p>\n\n\n\n<h4>Using the PC Cluster (held on December 3, 2004)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20041203-PCCluster.pdf\">Outline of the PC cluster<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20041203-SCore.pdf\">Using SCore<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20041203-SGE-cluster.pdf\">Using the Sun Grid Engine<\/a>&nbsp;(For PC cluster gyoku)<\/p>\n\n\n\n<h4>Using GCG (held on October 7-8, 2004)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20041008-seqweb21_IE_manual.pdf\">seqweb (overview + operation)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20041008-seqweb21_IE_practice.pdf\">seqweb (practice)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20041008-unix.pdf\">unix (practice)<\/a><br><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20041008-seqlab.pdf\">seqlab (outline)<\/a><\/p>\n\n\n\n<h4>Using the databases (held on June 29, 2004)<\/h4>\n\n\n\n<p><a href=\"https:\/\/supcom.hgc.jp\/internal\/english\/materials\/lect-pdf\/20040629-Database.pdf\">Outline of the databases<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>This page provides access to documents related to workshops hosted by HGC. Please note that SHIROKANE is constantly updating its system and the content of outdated material may be inconsistent with the current system.&#46;&#46;&#46;<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":1740,"menu_order":10,"comment_status":"closed","ping_status":"closed","template":"page-templates\/child-menu.php","meta":{"_locale":"en_US","_original_post":"https:\/\/gc.hgc.jp\/?page_id=1418"},"_links":{"self":[{"href":"https:\/\/gc.hgc.jp\/wp-json\/wp\/v2\/pages\/1744"}],"collection":[{"href":"https:\/\/gc.hgc.jp\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/gc.hgc.jp\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/gc.hgc.jp\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/gc.hgc.jp\/wp-json\/wp\/v2\/comments?post=1744"}],"version-history":[{"count":2,"href":"https:\/\/gc.hgc.jp\/wp-json\/wp\/v2\/pages\/1744\/revisions"}],"predecessor-version":[{"id":2706,"href":"https:\/\/gc.hgc.jp\/wp-json\/wp\/v2\/pages\/1744\/revisions\/2706"}],"up":[{"embeddable":true,"href":"https:\/\/gc.hgc.jp\/wp-json\/wp\/v2\/pages\/1740"}],"wp:attachment":[{"href":"https:\/\/gc.hgc.jp\/wp-json\/wp\/v2\/media?parent=1744"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}